Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 80712
Gene Symbol: ESX1
ESX1
0.010 GeneticVariation disease BEFREE Though recurrent somatic mutations in IMSCTs were rare, we identified NF2 mutations in 15.7% of tumors (ependymoma, N = 7; astrocytoma, N = 1), RP1 mutations in 5.9% of tumors (ependymoma, N = 3), and ESX1 mutations in 5.9% of tumors (ependymoma, N = 3). 31822682 2019
Entrez Id: 54790
Gene Symbol: TET2
TET2
0.010 PosttranslationalModification disease BEFREE TET2 promotor methylation and TET2 protein expression in pediatric posterior fossa ependymoma. 31777116 2019
Entrez Id: 5970
Gene Symbol: RELA
RELA
0.100 GeneticVariation disease BEFREE The present finding indicates that the TP53 p.R337H germline mutation is uncommon in patients with EPN in Brazil and screening of pediatric patients RELA fusion EPN may be informative to better understand the role of TP53 germline mutations in the development and prognosis of these tumors. 31728854 2020
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.070 GeneticVariation disease BEFREE The present finding indicates that the TP53 p.R337H germline mutation is uncommon in patients with EPN in Brazil and screening of pediatric patients RELA fusion EPN may be informative to better understand the role of TP53 germline mutations in the development and prognosis of these tumors. 31728854 2020
Entrez Id: 9119
Gene Symbol: KRT75
KRT75
0.010 GeneticVariation disease BEFREE The papillary growth pattern was strongly associated with the methylation class B of posterior fossa ependymoma (PFB, 5/5 cases) and tumors displayed DNA methylation sites that were significantly different when compared to PFB ependymomas without papillary growth. 31679042 2020
Entrez Id: 3351
Gene Symbol: HTR1B
HTR1B
0.010 Biomarker disease BEFREE Receptor overexpression in rare cancers included 5-HTR1B in nasopharyngeal carcinoma (17%), DRD1 in ependymoma (30%) and synovial sarcoma (21%), and DRD2 in astrocytoma (13%). 31478179 2019
Entrez Id: 1813
Gene Symbol: DRD2
DRD2
0.010 Biomarker disease BEFREE Receptor overexpression in rare cancers included 5-HTR1B in nasopharyngeal carcinoma (17%), DRD1 in ependymoma (30%) and synovial sarcoma (21%), and DRD2 in astrocytoma (13%). 31478179 2019
Entrez Id: 1812
Gene Symbol: DRD1
DRD1
0.010 Biomarker disease BEFREE Receptor overexpression in rare cancers included 5-HTR1B in nasopharyngeal carcinoma (17%), DRD1 in ependymoma (30%) and synovial sarcoma (21%), and DRD2 in astrocytoma (13%). 31478179 2019
Entrez Id: 10413
Gene Symbol: YAP1
YAP1
0.030 Biomarker disease BEFREE Together, these results demonstrate that the YAP1-MAMLD1 fusion functions as an oncogenic driver of ependymoma through recruitment of TEADs and NFIs, indicating a rationale for preclinical studies to block the interaction between YAP1 fusions and NFI and TEAD transcription factors. 31477715 2019
Entrez Id: 10046
Gene Symbol: MAMLD1
MAMLD1
0.020 Biomarker disease BEFREE Together, these results demonstrate that the YAP1-MAMLD1 fusion functions as an oncogenic driver of ependymoma through recruitment of TEADs and NFIs, indicating a rationale for preclinical studies to block the interaction between YAP1 fusions and NFI and TEAD transcription factors. 31477715 2019
Entrez Id: 4782
Gene Symbol: NFIC
NFIC
0.010 Biomarker disease BEFREE Together, these results demonstrate that the YAP1-MAMLD1 fusion functions as an oncogenic driver of ependymoma through recruitment of TEADs and NFIs, indicating a rationale for preclinical studies to block the interaction between YAP1 fusions and NFI and TEAD transcription factors. 31477715 2019
Entrez Id: 5934
Gene Symbol: RBL2
RBL2
0.010 AlteredExpression disease BEFREE LINC00899 expression increased in spinal ependymoma tissues whereas RBL2 expression decreased. 31432742 2019
Entrez Id: 100271722
Gene Symbol: LINC00899
LINC00899
0.010 AlteredExpression disease BEFREE LINC00899 expression increased in spinal ependymoma tissues whereas RBL2 expression decreased. 31432742 2019
Entrez Id: 4613
Gene Symbol: MYCN
MYCN
0.010 GeneticVariation disease BEFREE Taking these findings into account, we suggest to designate this molecular subgroup spinal ependymoma with MYCN amplification, SP-EPN-MYCN. 31414211 2019
Entrez Id: 339896
Gene Symbol: GADL1
GADL1
0.010 Biomarker disease BEFREE Histogram Analysis Parameters ADC for Distinguishing Ventricular Neoplasms of Ependymoma, Choroid Plexus Papilloma, and Central Neurocytoma. 31390342 2019
Entrez Id: 113451
Gene Symbol: AZIN2
AZIN2
0.010 Biomarker disease BEFREE Histogram Analysis Parameters ADC for Distinguishing Ventricular Neoplasms of Ependymoma, Choroid Plexus Papilloma, and Central Neurocytoma. 31390342 2019
Entrez Id: 5243
Gene Symbol: ABCB1
ABCB1
0.010 Biomarker disease BEFREE ABCB1 is a predictive marker of chemotherapy response in ependymoma patients and vardenafil, currently used to treat paediatric pulmonary hypertension in children, could be repurposed to reduce chemoresistance, migration and invasion in paediatric ependymoma patients at non-toxic concentrations. 31311995 2019
Entrez Id: 5970
Gene Symbol: RELA
RELA
0.100 Biomarker disease BEFREE Furthermore, treatment of the RELA-fused EPN cell line with the Notch inhibitors impaired the Notch signaling expression and revealed that Notch axis is not essential for cell proliferation and survival in this setting. 31308481 2019
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.030 AlteredExpression disease BEFREE NOTCH1 expression in ST-EPN was correlated with the CSCs markers VEGFA and L1CAM overexpression and JAG1 expression was correlated with the CCND1 and CDK6 overexpression. 31308481 2019
Entrez Id: 4851
Gene Symbol: NOTCH1
NOTCH1
0.020 AlteredExpression disease BEFREE NOTCH1 expression in ST-EPN was correlated with the CSCs markers VEGFA and L1CAM overexpression and JAG1 expression was correlated with the CCND1 and CDK6 overexpression. 31308481 2019
Entrez Id: 182
Gene Symbol: JAG1
JAG1
0.010 AlteredExpression disease BEFREE NOTCH1 expression in ST-EPN was correlated with the CSCs markers VEGFA and L1CAM overexpression and JAG1 expression was correlated with the CCND1 and CDK6 overexpression. 31308481 2019
Entrez Id: 57801
Gene Symbol: HES4
HES4
0.010 AlteredExpression disease BEFREE We found that among the ST-EPN subgroups the Notch signaling (NOTCH1, JAG1, JAG2, and HES4) is specifically activated in the ST-EPN-RELA. 31308481 2019
Entrez Id: 1021
Gene Symbol: CDK6
CDK6
0.010 AlteredExpression disease BEFREE NOTCH1 expression in ST-EPN was correlated with the CSCs markers VEGFA and L1CAM overexpression and JAG1 expression was correlated with the CCND1 and CDK6 overexpression. 31308481 2019
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.010 AlteredExpression disease BEFREE NOTCH1 expression in ST-EPN was correlated with the CSCs markers VEGFA and L1CAM overexpression and JAG1 expression was correlated with the CCND1 and CDK6 overexpression. 31308481 2019
Entrez Id: 3714
Gene Symbol: JAG2
JAG2
0.010 AlteredExpression disease BEFREE We found that among the ST-EPN subgroups the Notch signaling (NOTCH1, JAG1, JAG2, and HES4) is specifically activated in the ST-EPN-RELA. 31308481 2019